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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787888.1_cds_XP_016436739.1_307
CDS Infomation

[gene=LOC107762767] [db_xref=GeneID:107762767] [protein=laccase-5-like isoform X2] [protein_id=XP_016436739.1] [location=complement(join(150557..150568,151040..151101,151220..151504,151685..152176,153001..153129,153231..153475,153673..153824,153924..154073))] [gbkey=CDS]
Sequence

ATGAATTTTCCATTAATTGACAGTTTAATTAAGAAAAGAACCATAATATTGGATGCCTGC
AACAGCATGGCCAACCCTTTGTGCTATTTTTTCTTCATCTCCATTTTACTTCTCTTTGCA
AATGCGAAAACACAGTACCACCATTTTGTTATTCAAGCAACACCAGTAAAGAGGCTGTGC
AAGACCCATAACACTATAACAGTGAATGGACAATTCCCTGGACCAACATTGGAAGTGAAT
AATGGCGATACTTTAGTCATCAACGTGGTCAACAGAGCTCGATACAATGTCACCATTCAC
TGGCATGGAGTTAAGCAAATAAGAACAGCATGGGCAGATGGACCAGAATTTATAACACAA
TGCCCAATTAGACCAGGAGGGAGTTACACTTACCGCTTTACAATTCAAGAACAGGAAGGC
ACACTTTGGTGGCACGCCCACAGCTCATGGCTCAGGGCCACTGTTTACGGAGCTTTAATA
ATCCACCCAAAAGAAGGAGAATTCTACCCATTTCCTAACCCAAGAAGAGAGACACCCATT
CTGCTAGGTGAGTGGTGGGATGCAAACCCTATTGATGTTGTAAGACAGGCCACACGAACG
GGTGCAGCGCCTAATGTATCAGATGCATACACCATCAATGGTCAACCAGGTGACCTCTAC
AGGTGTTCAAGTAAAGATACTACCATAGTGCTTGTGGACTCTGGTGAGACCAGCCTTCTT
CGAGTTATCAACGCTGCACTAAATCAGCAGCTTTTCTTCACTGTGGCCAACCACAAGTTA
ACTGTTGTTGGAGCAGACGCCTCTTATGTTCAACCCTTCACCACATCAGTGCTTATGTTA
GGTCCAGGCCAAACTACTGATGTCCTTATCACTGGTAACCAGCCACCAGCCAGATACTAC
ATGGCAGCACAAGCTTACGCAAGTGCTCAAGGTGCACCTTTTGACAACACTACTACCACT
GCTATCCTTGAGTACAAGAATACTCCTTGCGCTGTTCAGGGGATCAAGATCAATCCAATT
TTTCCATCTTTACCACCATTTAACGACACTGCCACAGCCACTGCATTCACAACAAGTTTC
AGAAGTCCAAGCAAGGTCGAGTTGCCCACTGAAATCGATGAGAACTTGTTCATTACAGTT
GGGCTGGGACTCAAAAATTGCCCGAAAGGTGCAAGCTCCAGCAGTTGTCAAGGTCCAAAT
GGAACTCGATTCGCTGCCAGTATGAACAATGTGTCTTTTGTGCTACCGCCCAACTTCTCC
ATTCTGCAAGCACATCAACAAGGCATACCTGGAATTTTTTCAACTGATTTCCCAGCAGTC
CCACTTGTGAAATTTGATTATACGGGTAATGTCAGCCAATCACTGTGGCAACCAGTTCCA
GGAACTAAGGTTTACAAGCTAAAATATGGGGCAAAAGTGCAAGTTGTATTACAGGGAACA
AGCATTGTCACAGAAACACGGCAAGTTTACCTGTCAATGGATGGTCAGTCATCCGATTTG
TTGCTGACAACCCAGGAGTCTGGTTAA

Peptide Sequence

PEP ID

XP_016436739.1
PEP Infomation

PREDICTED: laccase-5-like isoform X2 [Nicotiana tabacum]
Sequence

MNFPLIDSLIKKRTIILDACNSMANPLCYFFFISILLLFANAKTQYHHFVIQATPVKRLC
KTHNTITVNGQFPGPTLEVNNGDTLVINVVNRARYNVTIHWHGVKQIRTAWADGPEFITQ
CPIRPGGSYTYRFTIQEQEGTLWWHAHSSWLRATVYGALIIHPKEGEFYPFPNPRRETPI
LLGEWWDANPIDVVRQATRTGAAPNVSDAYTINGQPGDLYRCSSKDTTIVLVDSGETSLL
RVINAALNQQLFFTVANHKLTVVGADASYVQPFTTSVLMLGPGQTTDVLITGNQPPARYY
MAAQAYASAQGAPFDNTTTTAILEYKNTPCAVQGIKINPIFPSLPPFNDTATATAFTTSF
RSPSKVELPTEIDENLFITVGLGLKNCPKGASSSSCQGPNGTRFAASMNNVSFVLPPNFS
ILQAHQQGIPGIFSTDFPAVPLVKFDYTGNVSQSLWQPVPGTKVYKLKYGAKVQVVLQGT
SIVTETRQVYLSMDGQSSDLLLTTQESG

Transcript Sequence

Gene sequence data has not been registered.